5 Top Rated Apps & Tools to Manage Payments & Invoices for Freelancers

Team Qwikbuild

Dec 17, 2025

For freelancers, getting paid on time is just as important as delivering good work. Yet invoicing and payment follow-ups are often treated as afterthoughts, handled manually, inconsistently, or differently for every client.

The right invoicing and payment tools help freelancers do three things well:
look professional, reduce payment delays, and stay organised as work increases.

This guide covers six widely used, well-rated tools that freelancers rely on to manage invoices and payments, with clear context on who each tool works best for, especially from an India and international client perspective.


1. Zoho Invoice - Strong All-Rounder for Indian Freelancers

Zoho Invoice is consistently chosen by freelancers because it covers the full invoicing workflow without forcing complexity early on. It’s reliable, mature, and designed to scale with you.


Why it’s rated highly

Freelancers value Zoho Invoice because it:

  • Handles professional invoice creation with ease

  • Supports recurring invoices and payment reminders

  • Feels stable and predictable even as client volume grows

It’s part of a larger ecosystem, but works perfectly well as a standalone invoicing tool.


India vs global use

  • India: Very strong, GST-ready invoices, local tax handling

  • International clients: Works well for invoicing; payments depend on connected gateways

Best for: Indian freelancers, consultants, and service providers who want a dependable, long-term invoicing system.


2. FreshBooks - Excellent for Hourly & Retainer Billing

FreshBooks is popular among freelancers who bill based on time or monthly retainers. It blends invoicing with time tracking, which reduces friction between work done and billing sent.


Why it’s rated highly

FreshBooks is often recommended because:

  • Invoices and time tracking are tightly connected

  • Payment reminders and recurring invoices reduce manual effort

  • The interface is simple enough to use daily without friction

India vs global use

  • India: Useful mainly for invoicing and tracking

  • International clients: Very strong, especially for US/EU clients

Best for: Designers, developers, consultants, and freelancers billing hourly or on retainers.


3. Wave - Simple, Free Invoicing for Early-Stage Freelancers

Wave is popular because it removes cost barriers for freelancers just getting started.


Why it’s rated highly

Wave is appreciated for:

  • Free, unlimited invoicing

  • Clean and simple interface

  • Minimal setup and learning curve

It allows freelancers to look professional without committing to paid software early on.


India vs global use

  • India: Works for invoicing; payment processing may vary

  • International clients: Commonly used for invoicing

Best for: New freelancers testing client work without upfront software costs.


5. Invoice Ninja - Flexible & Customisable Invoicing

Invoice Ninja stands out for freelancers who want control over how their invoices look and behave.


Why it’s rated highly

Freelancers often choose it because:

  • It offers generous free usage

  • Invoices can be customised extensively

  • It supports multiple payment gateways

India vs global use

  • India: Works well with connected gateways

  • International clients: Strong, especially with Stripe or PayPal

Best for: Freelancers who want flexibility and branding without heavy costs.

6. Refrens - Built with Freelancers in Mind

Refrens is designed specifically for freelancers and solo professionals who want invoicing, payment tracking, and client management in one place.


Why it’s rated highly

It’s trusted because it:

  • Keeps invoices, clients, and payment status together

  • Reduces follow-ups with clear tracking

  • Is simple enough for non-accounting users

India vs global use

  • India: Very strong for domestic freelancers

  • International clients: Works for invoicing; payments depend on setup

Best for: Freelancers who want an India-first, lightweight invoicing system.


A Practical Setup Many Freelancers Use

Most freelancers don’t rely on a single tool. A common, practical setup looks like this:

  • Invoicing tool (Zoho Invoice / Refrens / FreshBooks) → Create and send professional invoices

  • Payment gateway (Razorpay / Stripe / PayPal) → Collect payments via links or invoice embeds

  • Basic tracking (accounting software or spreadsheets) → Monitor income, pending invoices, and cash flow

This setup keeps things simple while remaining scalable.


How to Choose the Right Tool (Quick Decision Framework)

Use this as a shortcut:

  • Just starting out, low volume → Wave or Zoho Invoice

  • Hourly billing or retainers → FreshBooks

  • Want flexibility and branding → Invoice Ninja

  • India-first, freelancer-friendly → Refrens

Choosing based on your billing style usually matters more than feature depth.


Frequently Asked Questions

Do freelancers in India need GST invoices?
Only if you’re registered under GST. Many freelancers start without GST and switch later as revenue grows.

Can I invoice clients without a registered company?
Yes. Most tools allow individuals and sole proprietors to invoice clients professionally.

How do freelancers accept international payments?
Typically through payment gateways like Stripe or PayPal, connected to their invoicing tool.

Is free invoicing software enough long-term?
It works early on, but many freelancers move to paid tools as volume, reporting, or compliance needs increase.


Final Thoughts

The right invoicing and payment tool doesn’t just help you send bills, it helps you get paid on time, stay organised, and operate with confidence.

Most freelancers outgrow manual invoicing faster than they expect. Starting with a reliable tool early makes that transition smoother and reduces unnecessary stress later.

The goal isn’t to use the most powerful software.
It’s to use one that fits how you work today, and can grow with you tomorrow.